toolClusterPerRegion

This function calculates an appropriate number of clusters per region as it is needed for ClusterKMeans

Usage

toolClusterPerRegion(cells, ncluster, weight = NULL)

Arguments

cells

spatial names as returned by getCells

ncluster

The desired total number of clusters.

weight

named vector with weighting factors for each region for the cluster distribution, e.g. weight=c(AFR=3,EUR=0.5). weight > 1 will grant more cluster to a region and weight < 1 less cluster than by default.

Value

A matrix with regions in rows and number of cells and clusters in columns

See also

calcClusterKMeans, calcClusterBase

Author

Jan Philipp Dietrich